Resources

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Software

These tools are the result of in-house methodological developments and were extensively used in our group for teaching and research. They are free for academic purposes, and in some cases a Software License Agreement must be signed. Commercial licenses are subject to a fee. Contact N. Zamboni for more information.

SUMOFLUX

Toolbox for Targeted 13C metabolic flux ratio analysis.
Available under GPL v3 license.

SUMOFLUX package v1.3 (ZIP, 227.4 MB)

MNS (Metabolic Network Segmentation)

Toolbox for Metabolic Network Segmentation based on metabolome profiling data.
Available under GPL v3 license.

MNS package v1.0 (ZIP, 37.1 MB)

Data and scripts used in the paper. (ZIP, 111.1 MB)

anNET 

Network-embedded, thermodynamic analysis of metabolomics data.
Free for Academic purposes upon signing a Software License Agreement.
Read more

FiatFlux (obsolete)

13C flux ratio analysis of microbial metabolism.
Free for Academic purposes upon signing a Software License Agreement.
FiatFlux is conceptually deprecated. We recommend using SUMOFLUX instead.
Read more

 

 

 

 

 
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Sun Apr 30 18:59:21 CEST 2017
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