Institute of Molecular Systems Biology

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Publications

Full list of publications on external pagePubmed

Bibliometrics: external pageResearchGate, external pageGoogle Scholar

Selected publications:

  1. Caron, E., Roncagalli, R., Hase, T., Wolski, W.E., Choi, M., Menoita, M.G., Durand, S., Garcia-Blesa, A., Fierro-Monti, I., Sajic, T., Heusel, M., Weiss, T., Malissen, M., Schlapbach, R., Collins, B.C., Ghosh, S., Kitano, H., Aebersold, R., Malissen, B.*, and Gstaiger, M.* (2017). Precise Temporal Profiling of Signaling Complexes in Primary Cells Using SWATH Mass Spectrometry. external pageCell reports 18, 3219-3226    
  2. Hauri, S., Comoglio, F., Seimiya, M., Gerstung, M., Glatter, T., Hansen, K., Aebersold, R., Paro, R., Gstaiger, M.*, and Beisel, C*. (2016). A High-Density Map for Navigating the Human Polycomb Complexome. external pageCell reports 17, 583-595.
  3. Roncagalli, R., Hauri, S., Fiore, F., Liang, Y., Chen, Z., Sansoni, A., Kanduri, K., Joly, R., Malzac, A., Lahdesmaki, H., Lahesmaa, R., Yamasaki, S., Saito, T., Malissen, M., Aebersold, R., Gstaiger, M.*, and Malissen, B.* (2014). Quantitative proteomics analysis of signalosome dynamics in primary T cells identifies the surface receptor CD6 as a Lat adaptor-independent TCR signaling hub. external pageNature immunology 15, 384-392.
  4. Varjosalo, M., Sacco, R., Stukalov, A., van Drogen, A., Planyavsky, M., Hauri, S., Aebersold, R., Bennett, K.L., Colinge, J., Gstaiger, M.*, and Superti-Furga, G.* (2013a). Interlaboratory reproducibility of large-scale human protein-complex analysis by standardized AP-MS. external pageNat Methods 10, 307-314.
  5. Varjosalo, M., Keskitalo, S., Van Drogen, A., Nurkkala, H., Vichalkovski, A., Aebersold, R., and Gstaiger, M. (2013). The protein interaction landscape of the human CMGC kinase group. external pageCell reports 3, 1306-1320.
  6. Hauri, S., Wepf, A., van Drogen, A., Varjosalo, M., Tapon, N., Aebersold, R., and Gstaiger, M. (2013). Interaction proteome of human Hippo signaling: modular control of the co-activator YAP1. external pageMol Syst Biol 9, 713.
  7. Glatter, T., Schittenhelm, R.B., Rinner, O., Roguska, K., Wepf, A., Junger, M.A., Kohler, K., Jevtov, I., Choi, H., Schmidt, A., Nesvizhskii, A.I., Stocker, H., Hafen, E., Aebersold, R., and Gstaiger, M. (2011). Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome. external pageMol Syst Biol 7, 547.
  8. Ribeiro, P.S., Josue, F., Wepf, A., Wehr, M.C., Rinner, O., Kelly, G., Tapon, N.*, and Gstaiger, M.* (2010). Combined functional genomic and proteomic approaches identify a PP2A complex as a negative regulator of Hippo signaling. external pageMol Cell 39, 521-534.
  9. Wepf, A., Glatter, T., Schmidt, A., Aebersold, R., and Gstaiger, M. (2009). Quantitative interaction proteomics using mass spectrometry. external pageNat Methods 6, 203-205.
  10. Gstaiger, M., and Aebersold, R. (2009). Applying mass spectrometry-based proteomics to genetics, genomics and network biology. external pageNat Rev Genet 10, 617-627.
  11. Glatter, T., Wepf, A., Aebersold, R., and Gstaiger, M. (2009). An integrated workflow for charting the human interaction proteome: insights into the PP2A system. external pageMol Syst Biol 5, 237.
  12. Rinner, O., Mueller, L.N., Hubalek, M., Muller, M., Gstaiger, M., and Aebersold, R. (2007). An integrated mass spectrometric and computational framework for the analysis of protein interaction networks. external pageNat Biotechnol 25, 345-352.
  13. Gingras, A.C., Gstaiger, M., Raught, B., and Aebersold, R. (2007). Analysis of protein complexes using mass spectrometry. external pageNat Rev Mol Cell Biol 8, 645-654.
  14. Gstaiger, M., Luke, B., Hess, D., Oakeley, E.J., Wirbelauer, C., Blondel, M., Vigneron, M., Peter, M., and Krek, W. (2003). Control of nutrient-sensitive transcription programs by the unconventional prefoldin URI. external pageScience 302, 1208-1212.
  15. Gstaiger, M., Jordan, R., Lim, M., Catzavelos, C., Mestan, J., Slingerland, J., and Krek, W. (2001). Skp2 is oncogenic and overexpressed in human cancers. external pageProc Natl Acad Sci U S A 98, 5043-5048.
  16. Gstaiger, M., Georgiev, O., van Leeuwen, H., van der Vliet, P., and Schaffner, W. (1996). The B cell coactivator Bob1 shows DNA sequence-dependent complex formation with Oct-1/Oct-2 factors, leading to differential promoter activation. external pageEmbo J 15, 2781-2790.
  17. Gstaiger, M., Knoepfel, L., Georgiev, O., Schaffner, W., and Hovens, C.M. (1995). A B-cell coactivator of octamer-binding transcription factors. external pageNature 373, 360-362.

 

*) co-corresponding author

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